CDS

Accession Number TCMCG018C09478
gbkey CDS
Protein Id XP_004147268.2
Location complement(join(8335351..8335743,8337071..8337229,8337790..8337892,8338353..8338433,8338943..8339019,8339103..8339174,8339284..8339360,8340284..8340344,8341432..8341529,8342900..8343007,8345054..8345343,8345451..8345516,8346580..8346659,8347287..8347456,8349655..8349686,8349807..8349967,8350258..8350410,8350705..8350769,8350858..8350989,8351581..8351687,8352301..8352424,8352886..8352964,8353273..8353372,8353725..8353807,8354401..8354451,8360207..8360677,8361069..8361263))
Gene LOC101214899
GeneID 101214899
Organism Cucumis sativus

Protein

Length 1195aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA182750
db_source XM_004147220.3
Definition tRNA ligase 1 isoform X1 [Cucumis sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description atrnl,rnl
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000281        [VIEW IN EMBL-EBI]
GO:0000394        [VIEW IN EMBL-EBI]
GO:0000910        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003972        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006388        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008356        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0008452        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010069        [VIEW IN EMBL-EBI]
GO:0010070        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010928        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016886        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042245        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0061640        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGCGTTGCAGAGAATTTTCTGTGCTAAAACTCTTCCTCACCCTCCTTTTTCTTCGTCTTACAGGGTCTTCCCCTTCATTTCCCACCCTCTTTCCCACTATATCTTACCGCGCTCTCTCACTCTCGCACCTTTAACTTCCTCCCCTCTTCCCATTTCTTGTGATTCTCGATTCGTCATGCCTTACAATCAGCGAAGGGGTAGCCGTGGAGAACAGAAGTGGAAAGAGAAGGCGAAGGCTGACAGAAATTCTACGGAGTCAGAGGCTGCTGCGGAAGTTGTTACTAATGCACTCGGTAAATTGAGGGTCACTGAAAGTGATCAACCTCATGTTCTTACTTCTAGTGCTCAGTTTGGAAATGCCCAGCTGACAAATCAGGCCACCCCTGGACTTGCTCATAGAGCAATTTGGAAACCAAAAGCGTATGGAACAACCAGTGGAGCTGCAGTGATTGAAGGTGAAAAAGCACCCACCAACGAAACGTCAACTGAAAACAAAGGGAGTAATGCTGGAGTGGCAGCGCAGGATGGCGTTGTTAGCCTGAGTCAATTATTCAAGAGCAATCAGATTGAAAAATTTACTGTGGATAACTCCACATACACACAGGCACAAATAAGAGCAACGTTCTACCCTAAATTTGAGAACGAGAAGTCGGATCAGGAGATTAGAACCAGGATGATAGAGATGGTATCAAAAGGCTTGGCTACGTTGGAGGTTTCACTAAAACACTCAGGGTCATTGTTTATGTACGCTGGCCATGAAGGTGGAGCATATGCAAAAAACAGCTTCGGGAATATCTACACTGCTGTTGGTGTCTTTGTTTTGGGAAGGATGTTTCGAGAGGCTTGGGGAGCTGAAGCAGCAAAAAAGCAGGCAGAATTCAATGATTTCCTTGAGAGTAACCGCATGTGCATATCAATGGAGTTAGTAACTGCTGTTTTGGGAGATCATGGCCAGCGACCACGAGAGGATTATGTGGTAGTTACAGCAGTTACAGAACTGGGCAAGGGAAAGCCAAAGTTCTATTCAACTGCAGAAATAATAGCTTTTTGTAGAAACTGGCGCTTACCAACCAATCATGTTTGGTTATTCTCAAGCAGGAAGTCGGTGACATCTTTTTTTGCTGCATTTGATGCCCTATGTGAAGAAGGAACTGCGACTTCAGTATGTAAGGCTCTTGATGAAGTTGCAGAAATATCTGTACCAGGATCAAAAGATCATATAAAAGTGCAGGGTGAAATTCTTGAGGGTCTTGTAGCCCGTATGGTTAGCCATGAGAGTTCAAAACACATGCAGAAAGTATTGGAAGAATTTCCTGCTCTGCCAGACAACGAAGGAGGTGGACTTGATTTAGGACCAAGCCTAAGGGAAATTTGTGCTGCAAATAGGTCAGATGAGAAACAGCAAATAAAAGCACTTCTTCAAAACGTTGGTACCGCCTTTTGCCCTGACCACTCTGACTGGTACGGTGATTCCCACTCAAGAAATGCAGACAGATCTGTTTTATCAAAATTCTTACAAGCCAACCCGGCTGATTTTTCGACCTCCAAATTACAGGAAATGATTCGTCTAATGAGAGAAAGACGCCTTCCAGCTGCCTTCAAATGCTATCATAATTTCCACAAAGTTGCTTCCATATCAAATGACAACCTTTTCTATAAAATGGTCATTCATGTTCACAGTGACTCTGCTTTTCGGCGATATCAAAAAGAATTGAGGCACAAGCCAAGTTTGTGGCCACTATATCGAGGCTTTTTTGTTGACATCAATTTATTCAAAGAAAATAAGGACAAGGCTGCTGAATTAGTGAAAAGTAAAAGCAATTTGATGGACACTGAAGGCAATGGGACCTTAGGAAGAGATGGATTTGCCGATGAAGATTCCAATCTGATGATAAAACTGAAATTTCTTACATATAAGCTGCGGACTTTCTTGATTCGTAATGGCTTATCAATTCTCTTCAAAGAAGGTGCAGTTGCATACAAGGCCTATTACTTGAGGCAAATGAAGCTATGGGGTACATCAGCTGGAAAACAAAGGGAGCTCAGCAAGATGCTTGACGAATGGGCTGTATATATGAGGAGGAAGTATGGAAACAAACAACTGTCGTCCGCTACCTATCTTAGTGAAGCTGAACCTTTTCTTGAACAGTATGCTAAACGCAGTCCTCAGAATCAGGCTCTTATCGGATCTGCTGGAAATTTAGTTAGAGCAGAAGATTTCTTGGCCATTGTCGAGGAAGGAATGGATGAAGAGGGTGATCTTCAGAAGGAGCTGGAAGCAGCACCATCAAGTCCAATGCTCTCTGGGAAGGATGCTGTCCCAAAAGCAGAGGGTCTAATTGTGTTTTTTCCAGGAATCCCAGGCTGTGCAAAGTCTGCTCTTTGCAAAGAGATACTGAAAGCTCCAGGAGCACTTGGAGATGATCGGCCAGTCAATACTCTAATGGGTGATCTGATTAAAGGAAGATATTGGCAGAAGGTTGCTGATGACCGTAGGAGAAAGCCATACTCTATAATGCTTGCAGACAAAAATGCACCAAATGAAGAAGTGTGGAGACAAATTGAAGATATGTGTCGTAGCACAAGAGCCTCTGCAGTTCCAGTCATACCTGATTCTGAAGGAACTGATTCTAACCCCTTCTCTCTTGACGCTCTGGCTGTCTTCATGTTTCGTGTGCTGCAAAGAGTTAACCATCCAGGAAATCTCGACAAGGCATCCCCAAATGCAGGTTATGTCCTACTAATGTTTTATCACCTTTATGACGGCAAGAGTCGCAGAGAGTTTGAAGGTGAGCTTATTGATCGTTTTGGGTCTTTGGTTAAGATGCCATTGCTGAAATCTGATAGAAATCCTTTACCTGATGATTTGAAGACTATCTTAGAGGAAGGAATAAGTCTGTATAAGCTCCATACTAGTAGACATGGAAGGGTGGACTCCACCAAAGGTTCCTATGCGAAAGAATGGGCTAAATGGGAAAAGCAATTGCGAGAAACTTTGTTTAGTAACACTGAGTATCTCAATGCTATTCAGGTTCCATTTGAGTTGGCTGTTCAAGATGTGTTGGAGCAATTAAAGAAGGTTTCGAAAGGTGACTATAAAAGCCCTATTACAGAGAGGAGGAAGTCTGGGGCCATAGTATTTGCTGCTGTCAGTCTTCCTGTTCAGGAGATCCAAAATCTTCTTGGCACTTTGGCCAAGAAAAATTCTCGTATTGAAGCATTCCTTAGAGAACACTACAAGGACTATAAACTTAAAGGGGCTCATGTCACACTTGCACACAAGAGAAGCCATGGCGTTAAAGGTGTAGCTGACTATGGCATCTTCGAAAACAAAGAAGTTCCAGTCGAGCTGACAGCCCTACTTTTCTCAGATAAAATGGCTGCCTTTGAGGCTCGCCTCGGCAGCATTGAGAATGAAAGAGTGATTTCCAAAAATGAGTGGCCACATGTAACATTATGGACTAGAGAAGGGGTTGCAGCAAAGGAAGCTAACGCCTTACCACAGTTAGTATCAGAAGGCAAAGCAACTCTAGTTGAAATCAATCCTCCCATCATCATTTCAGGCATGGTGAAATTCTTTTAG
Protein:  
MSALQRIFCAKTLPHPPFSSSYRVFPFISHPLSHYILPRSLTLAPLTSSPLPISCDSRFVMPYNQRRGSRGEQKWKEKAKADRNSTESEAAAEVVTNALGKLRVTESDQPHVLTSSAQFGNAQLTNQATPGLAHRAIWKPKAYGTTSGAAVIEGEKAPTNETSTENKGSNAGVAAQDGVVSLSQLFKSNQIEKFTVDNSTYTQAQIRATFYPKFENEKSDQEIRTRMIEMVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGAEAAKKQAEFNDFLESNRMCISMELVTAVLGDHGQRPREDYVVVTAVTELGKGKPKFYSTAEIIAFCRNWRLPTNHVWLFSSRKSVTSFFAAFDALCEEGTATSVCKALDEVAEISVPGSKDHIKVQGEILEGLVARMVSHESSKHMQKVLEEFPALPDNEGGGLDLGPSLREICAANRSDEKQQIKALLQNVGTAFCPDHSDWYGDSHSRNADRSVLSKFLQANPADFSTSKLQEMIRLMRERRLPAAFKCYHNFHKVASISNDNLFYKMVIHVHSDSAFRRYQKELRHKPSLWPLYRGFFVDINLFKENKDKAAELVKSKSNLMDTEGNGTLGRDGFADEDSNLMIKLKFLTYKLRTFLIRNGLSILFKEGAVAYKAYYLRQMKLWGTSAGKQRELSKMLDEWAVYMRRKYGNKQLSSATYLSEAEPFLEQYAKRSPQNQALIGSAGNLVRAEDFLAIVEEGMDEEGDLQKELEAAPSSPMLSGKDAVPKAEGLIVFFPGIPGCAKSALCKEILKAPGALGDDRPVNTLMGDLIKGRYWQKVADDRRRKPYSIMLADKNAPNEEVWRQIEDMCRSTRASAVPVIPDSEGTDSNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGYVLLMFYHLYDGKSRREFEGELIDRFGSLVKMPLLKSDRNPLPDDLKTILEEGISLYKLHTSRHGRVDSTKGSYAKEWAKWEKQLRETLFSNTEYLNAIQVPFELAVQDVLEQLKKVSKGDYKSPITERRKSGAIVFAAVSLPVQEIQNLLGTLAKKNSRIEAFLREHYKDYKLKGAHVTLAHKRSHGVKGVADYGIFENKEVPVELTALLFSDKMAAFEARLGSIENERVISKNEWPHVTLWTREGVAAKEANALPQLVSEGKATLVEINPPIIISGMVKFF